Tools for RNAseq Analyses
This is basically a list of resources that I have put together as a reference for my own research, but I’m publishing it here in case it might help others
Methods
- Review papers
- De Novo Transcriptome Assembly
- Alignment Tools
- Reference-Based Transcript Identification
- Quantification Tools
- Normalization Methods
- Batch Correction
- Differential Expression
- Differential Splicing
- eQTL Analyses
- Gene-trait Association
- Pathway Analyses