Expression Quantitative Trait Loci
- matrix eQTL (Shabalin, A. A. (2012). Matrix eQTL: ultra fast eQTL analysis via large matrix operations. {Bioinformatics, 28(10), 1353–1358](http://doi.org/10.1093/bioinformatics/bts163))
- FastQTL (Ongen, H., Buil, A., Brown, A. A., Dermitzakis, E. T., & Delaneau, O. (2016). Fast and efficient QTL mapper for thousands of molecular phenotypes. Bioinformatics, 32(10), 1479–1485)
- ulfasQTL (Yang, Q., Hu, Y., Li, J., & Zhang, X. (2017). ulfasQTL: an ultra-fast method of composite splicing QTL analysis. BMC Genomics, 1–9)